GO-066

2022-05-17

2024-05-17

Extended microbiome characterization by the exploitation of the microbial intra-community synergies — towards better understanding of the Exposome

dr Krzysztof Mnich

We want to explore synergistic interactions between features and by this go beyond currently available approaches that are ill-fitted to analyse metagenomic data as they are not exploiting the existence of these relations. Specifically, we will investigate synergies in three exposome related use-cases: • Anomaly detection in microbiomes - identification of resistomes for AMR studies, • Patient stratification - usage of microbiota profiles for establishing health status of the patient, • Calculation of distances between microbiomes - prediction of the geographical origin of the sample.